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Paul et al. 2016 - Scientific Reports

source_code_bioinformatics_analysis_paul_et_al._2016.zip
File Size: 99 kb
File Type: zip
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source_code_mathematical_model_paul_et_al._2016.rar
File Size: 2 kb
File Type: rar
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Cantone et al. 2017

​Boolean model example- Martina Cantone
readme.txt
File Size: 4 kb
File Type: txt
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boolean_code_for_public.zip
File Size: 493 kb
File Type: zip
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scenario_1_descr.gif
File Size: 8733 kb
File Type: gif
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scenario_2_descr.gif
File Size: 2816 kb
File Type: gif
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scenario_3_descr.gif
File Size: 6133 kb
File Type: gif
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​ODE model example (Matlab) - Guido Santos
inftoy.m
File Size: 7 kb
File Type: m
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​ABM example (NetLogo) - Guido Santos
lung.nlogo
File Size: 13 kb
File Type: nlogo
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Reiprich et al. 2017 - Glia

sox10_mirs_sox9.cys
File Size: 25 kb
File Type: cys
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source_code_mathematical_model_reiprich_et_al_2017_.rar
File Size: 469 kb
File Type: rar
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sox9_sox10_bioinformatics.zip
File Size: 10484 kb
File Type: zip
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Wentker et al. 2017 - Journal of Immunology

Network in different formats is available in this webpage

Santos et al. 2017 - Colorectal cancer

colorectal_model.zip
File Size: 4040 kb
File Type: zip
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Santos et al. 2018 - Alveolar model

Click here to download the alveolus model code.

Alveolum model simulations

Alveolus model simulation - nominal solution
Alveolus model simulation - higher interchange probability between sessile and benthonic phases of lining liquid of bacteria
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